ARTÍCULO
TITULO

TALEN-Mediated Gene Editing of slc24a5 (Solute Carrier Family 24, Member 5) in Kawakawa, Euthynnus affinis

Dipak Pandey    
Takahiro Matsubara    
Taiju Saito    
Yukinori Kazeto    
Koichiro Gen    
Tetsushi Sakuma    
Takashi Yamamoto    
Miyuki Mekuchi and Rie Goto    

Resumen

Transcription activator-like effector (TALE) nucleases (TALENs) mediated gene editing methods are becoming popular and have revealed the staggering complexity of genome control during development. Here, we present a simple and efficient gene knockout using TALENs in kawakawa, Euthynnus affinis, using slc24a5. We examined slc24a5 gene expression and functional differences between two TALENs that hold the TALE scaffolds, +153/+47 and +136/+63 and target slc24a5. Developmental changes in slc24a5 transcripts were seen in early-stage embryos by real-time PCR; slc24a5 expression was first detected 48 h post fertilization (hpf), which increased dramatically at 72 hpf. Four TALENs, 47- and 63-type of two different target loci (A and B), respectively, were constructed using Platinum TALEN and evaluated in vitro by a single-strand annealing (SSA) assay. TALEN activities were further evaluated in vivo by injecting TALEN mRNAs in the two-cell stage of the zygote. Most of the TALEN-induced mutants showed mosaic patterns in the retinal pigment epithelium (RPE) and fewer melanin pigments on the body at 72 hpf and later when compared to the control, implying the gene?s association with melanin pigment formation. A heteroduplex mobility assay (HMA) and the genome sequence further confirmed the TALEN-induced mutations of substitution, insertion, and deletion at an endogenous locus.

Palabras claves

kawakawa -  slc24a5 -  TALEN -  melanin -  SSA -  HMA

 Artículos similares

       
 
Jacob Douek, Giovanni Giallongo, Zoya Harbuzov, Bella S. Galil and Baruch Rinkevich    
The rhizostomatid scyphozoan Rhopilema nomadica is one of the most notorious marine invasive species established in the eastern Mediterranean Sea. Using seven microsatellite loci, here, we examined the population genetic structures on 587 individual tiss... ver más

 
Manuel Mangoni, Francesco Petrizzelli, Niccolò Liorni, Salvatore Daniele Bianco, Tommaso Biagini, Alessandro Napoli, Marta Adinolfi, Pietro Hiram Guzzi, Antonio Novelli, Viviana Caputo and Tommaso Mazza    
The process of aging is a complex phenomenon that involves a progressive decline in physiological functions required for survival and fertility. To better understand the mechanisms underlying this process, the scientific community has utilized several to... ver más
Revista: Applied Sciences

 
Leyla Nazari, Vida Ghotbi, Mohammad Nadimi and Jitendra Paliwal    
This study proposes a hybrid gene selection method to identify and predict key genes in Arabidopsis associated with various stresses (including salt, heat, cold, high-light, and flagellin), aiming to enhance crop tolerance. An open-source microarray data... ver más
Revista: Algorithms

 
Jianguang Wang and Shiyi Li    
The use of sludge fermentation broth (FB) as a co-metabolic carbon source for treating 2,4,6-trichlorophenol (2,4,6-TCP) wastewater is a novel strategy. The key to the feasibility of this strategy is whether the FB can promote the growth of functional mi... ver más
Revista: Water

 
Vincent Schilling, Peter Beyerlein and Jeremy Chien    
The identification of biomarkers is crucial for cancer diagnosis, understanding the underlying biological mechanisms, and developing targeted therapies. In this study, we propose a machine learning approach to predict ovarian cancer patients? outcomes an... ver más
Revista: Algorithms