Inicio  /  Future Internet  /  Vol: 13 Par: 5 (2021)  /  Artículo
ARTÍCULO
TITULO

Generating Synthetic Training Data for Supervised De-Identification of Electronic Health Records

Claudia Alessandra Libbi    
Jan Trienes    
Dolf Trieschnigg and Christin Seifert    

Resumen

A major hurdle in the development of natural language processing (NLP) methods for Electronic Health Records (EHRs) is the lack of large, annotated datasets. Privacy concerns prevent the distribution of EHRs, and the annotation of data is known to be costly and cumbersome. Synthetic data presents a promising solution to the privacy concern, if synthetic data has comparable utility to real data and if it preserves the privacy of patients. However, the generation of synthetic text alone is not useful for NLP because of the lack of annotations. In this work, we propose the use of neural language models (LSTM and GPT-2) for generating artificial EHR text jointly with annotations for named-entity recognition. Our experiments show that artificial documents can be used to train a supervised named-entity recognition model for de-identification, which outperforms a state-of-the-art rule-based baseline. Moreover, we show that combining real data with synthetic data improves the recall of the method, without manual annotation effort. We conduct a user study to gain insights on the privacy of artificial text. We highlight privacy risks associated with language models to inform future research on privacy-preserving automated text generation and metrics for evaluating privacy-preservation during text generation.

 Artículos similares

       
 
Daiho Uhm and Sunghae Jun    
Due to the expansion of the internet, we encounter various types of big data such as web documents or sensing data. Compared to traditional small data such as experimental samples, big data provide more chances to find hidden and novel patterns with big ... ver más
Revista: Future Internet

 
Xin Yao, Juan Yu, Jianmin Han, Jianfeng Lu, Hao Peng, Yijia Wu and Xiaoqian Cao    
Generating differentially private synthetic human mobility trajectories from real trajectories is a commonly used approach for privacy-preserving trajectory publishing. However, existing synthetic trajectory generation methods suffer from the drawbacks o... ver más

 
Chengbin Deng, Xiaoyu Dong, Huihai Wang, Weiying Lin, Hao Wen, John Frazier, Hung Chak Ho and Louisa Holmes    
Walking is the most common, environment-friendly, and inexpensive type of physical activity. To perform in-depth walkability analysis, one option is to objectively evaluate different aspects of built environment related to walkability. In this study, we ... ver más

 
Hossein Bagheri, Michael Schmitt and Xiaoxiang Zhu    
So-called prismatic 3D building models, following the level-of-detail (LOD) 1 of the OGC City Geography Markup Language (CityGML) standard, are usually generated automatically by combining building footprints with height values. Typically, high-resolutio... ver más

 
Alexandros Stergiou, Grigorios Kalliatakis and Christos Chrysoulas    
To deal with the richness in visual appearance variation found in real-world data, we propose to synthesise training data capturing these differences for traffic sign recognition. The use of synthetic training data, created from road traffic sign templat... ver más